Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015934496.1_cds_XP_016480540.1_71967
CDS Infomation

[gene=LOC107801688] [db_xref=GeneID:107801688] [protein=regulatory protein NPR3-like] [protein_id=XP_016480540.1] [location=complement(join(6226..6253,6379..6640,6859..7056,7301..8054,8687..9208))] [gbkey=CDS]
Sequence

ATGGAGAGCGGAAACGAGCTTTCGTCATCCTTGAGTTTTGCTTCATCTTCTTATGTATCG
AACGGTTGCAGTAGCCCCCAAGAACCAGGACCAAATCTTGATCTTTTGAGTAATCTAAGT
GGCAGTCTTGAGAAACTCCTGCTTAATCCTGAATATGACTACAGCGATGCAGAAGTAGTC
GTTGAGGGGATTAGTGTTGGCGTTAATCGCTGTATCTTAGCTGCACGAAGTCAGTTTTTC
CACGAAACGTTTAAGAAGCACAATGAGAATACCTCAAAAGATGAAAAGCCTAAGTATTTG
CTTAAGGATTTGGTGCCTTTTGCCTCAATTGGCTATGAAGTATTCTCGGTCTTCCTGAAT
TATTTGTATACCGGAAAGATTAAACCTTCTCCTCCAGAAGTTTCAACTTGTGTTGATAAT
GTGTGCGCTCATGATGCTTGTCGCCCTGCCATTAATTATTTCATGGAACTCATGTATGCT
TCATCCACCTTTCAAATCAACGAACTCATTATGGTTGTAGAGCGCCGTCTTGTCAACTTC
ATCGATAAGGCTACTCCAGAGGATGTAATTCCCATACTTTTAGTTGCCTTTCACTGCTCA
TCTAACCAGCTTCTTGAGCACTGCATCCAGAGAGTGACACGATCCGATCTAGACAATGCT
ACTCTTGAGAAAGAACTCCCTCATGAAGTTTTGACTGACATAAAAACAAGGCGCCTCAAG
TCTCGACAAGAACTTGAACATGATTCGATAGAAGTGGACTCCTTGAGTGAAAAGAGAATT
AGGAGGATTCTGAAGGCTCTGGAATCCGACGACATTGAATTGCTTAAGTTACTTCTTGAA
GAGTCTAATGTCACTTTAGACGATGCTTGTGCTCTTCATTACGCAGCTGCCTATTGTAAC
TCCAAGGTTGTGAATGAGGTCCTCGAGCTGGATTTAGCTGATGTCAATCTTCAGAATTCC
CGAGGATATAACGTCCTTCACATTGCTGCTAGACGAAAGGAGCCATCAATAATAATGGGA
CTACTCGAAAAAGGAGCATCTGTCTTGAATACTACACGGGATGGAAACACAGCACTATCA
ATCTGTCGGAGATTGACTCGGCCAAAGGATTATAATGAGCCAACGAAGCAAGGGAAAGAA
ACTAATAAGGACCGCATATGCATTGATATTTTGGAGAGAGAGACGATTAGGAATCCTATG
GTTGGGATCATGTCTTCGTCATCATTGGTGTTGGCTGATGAATTACTCATGAGGTTGCTT
TTATTTGAAAATAGAGTGGCATTGGCGCGAATGTTATTTCCTCATGAAGCCAAGCTAGCT
ATGGAAAAAGCACATGCTAATTCGACGTTGGAGTTTACTGGAATTTCAGCAACAAATGGC
TTATCTAGAAATCTGAGAGGGGTTGACTTGAATGAATTACCATCTGAGCAAGTGAAAAGA
CTCCAAGAACGGCTGTGCGCACTGCAAAAAACAGTGGAGACAGGTCAACGTTTCTTCCCT
AATTGCTCCGAGGTTTTAGATAGATTACTAGAGGACGACTTGCTAGATTCCTTAACGTTG
GAAAGAGGCACCGCTGAAGAACAAAGATTAAAGAAGATGCGATACACAGAACTCAAGGAT
GATGTTATGAAGGCATTCAACAAAGACAAAGCTGAAAAGTATTGGGAAGGCTTCTCTGCA
TCTTCCTCCTCCTCATCGTCCCCAAAGACTAGAGTTAGCCACAAGATTAGGAAGAACTTG
TTTAAGGGCAGCCCGATGCACTAA

Peptide Sequence

PEP ID

XP_016480540.1
PEP Infomation

PREDICTED: regulatory protein NPR3-like [Nicotiana tabacum]
Sequence

MESGNELSSSLSFASSSYVSNGCSSPQEPGPNLDLLSNLSGSLEKLLLNPEYDYSDAEVV
VEGISVGVNRCILAARSQFFHETFKKHNENTSKDEKPKYLLKDLVPFASIGYEVFSVFLN
YLYTGKIKPSPPEVSTCVDNVCAHDACRPAINYFMELMYASSTFQINELIMVVERRLVNF
IDKATPEDVIPILLVAFHCSSNQLLEHCIQRVTRSDLDNATLEKELPHEVLTDIKTRRLK
SRQELEHDSIEVDSLSEKRIRRILKALESDDIELLKLLLEESNVTLDDACALHYAAAYCN
SKVVNEVLELDLADVNLQNSRGYNVLHIAARRKEPSIIMGLLEKGASVLNTTRDGNTALS
ICRRLTRPKDYNEPTKQGKETNKDRICIDILERETIRNPMVGIMSSSSLVLADELLMRLL
LFENRVALARMLFPHEAKLAMEKAHANSTLEFTGISATNGLSRNLRGVDLNELPSEQVKR
LQERLCALQKTVETGQRFFPNCSEVLDRLLEDDLLDSLTLERGTAEEQRLKKMRYTELKD
DVMKAFNKDKAEKYWEGFSASSSSSSSPKTRVSHKIRKNLFKGSPMH

Transcript Sequence

Gene sequence data has not been registered.